Mayo Clinic Primary Biliary Cholangitis Data

Train/test data and risk predictions from four models

pbc_scalib

Mayo Clinic Primary Biliary Cholangitis Data

Survival calibration objects

Data structure used in this package

scalib()

Survival calibration objects

print(<scalib>)

Print Calibration Test Results

as.data.table(<scalib>)

Coerce to data.table

Greenwood-Nam-D'Agostino (GND) test

Test for mis-calibration in the survival setting.

scalib_gnd() scalib_gnd_manual() vec_gnd() vec_gnd_manual()

Greenwood-Nam-D'Agostino (GND) Test

Hazard regression plots

Calibration slope plots and integrated calibration index

scalib_hare()

Calibration Slope using Hazard Regression (HARE)

Predicted risk helpers

Functions to help handle predicted risk values.

predrisk_bin_segments()

Bin predicted risk for plotting

predrisk_grp_prcnt()

Cut data into percentile groups